Genomics|Resources|2012 CDC Authored Publications
Genomics & Health Impact Update
The Office of Public Health Genomics (OPHG) provides updated and credible information on how genomic information and family health history can improve health and influence policy and practice.
CDC-Authored Publications 2012
Genetic characterization of Cryptosporidium spp. in diarrhoeic children from four provinces in South Africa
Abu Samra N, Thompson PN, Jori F, Frean J, Poonsamy B, du Plessis D, Mogoye B, Xiao L. Zoonoses Public Health. 2012 Jun 20.
Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including Shiga toxin encoding phage stx2
Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, Broomall S, Chain PS, Chertkov O, Chokoshvili O, Coyne S, Davenport K, Detter JC, Dorman W, Erkkila TH, Folster JP, Frey KG, George M, Gleasner C, Henry M, Hill KK, Hubbard K, Insalaco J, Johnson S, Kitzmiller A, Krepps M, Lo CC, Luu T, McNew LA, Minogue T, Munk CA, Osborne B, Patel M, Reitenga KG, Rosenzweig CN, Shea A, Shen X, Strockbine N, Tarr C, Teshima H, van Gieson E, Verratti K, Wolcott M, Xie G, Sozhamannan S, Gibbons HS. PLoS One. 2012 ;7(11):e48228.
Molecular characterization of diarrheagenic Escherichia coli from Libya
Ali MM, Mohamed ZK, Klena JD, Ahmed SF, Moussa TA, Ghenghesh KS. Am J Trop Med Hyg. 2012 May;86(5):866-71.
Age-associated DNA methylation in pediatric populations
Alisch RS, Barwick BG, Chopra P, Myrick LK, Satten GA, Conneely KN, Warren ST. Genome Res. 2012 Apr;22(4):623-32.
Using routinely reported tuberculosis genotyping and surveillance data to predict tuberculosis outbreaks
Althomsons SP, Kammerer JS, Shang N, Navin TR. PLoS One. 2012 ;7(11):e48754.
Recommendations for publication of viral genetic data and sample access for novel viruses and strains
Arrigo NC, Briese T, Calisher CH, Drebot MA, Hjelle B, Leduc JW, Powers AM, Repik PM, Roehrig JT, Schmaljohn CS, Tesh RB, Weaver SC. Am J Trop Med Hyg. 2012 Feb;86(2):189-191.
Existence of the Rdl mutant alleles among the Anopheles malaria vector in Indonesia
Asih PB, Syahrani L, Rozi IE, Pratama NR, Marantina SS, Arsyad DS, Mangunwardoyo W, Hawley W, Laihad F, Shinta S, Sukowati S, Lobo NF, Syafruddin D. Malar J. 2012 Feb 25;11(1):57.
Looking back at genomic medicine in 2011
Auffray C, Caulfield T, Khoury MJ, Lupski JR, Schwab M, Veenstra T. Genome Med. 2012 Jan 30;4(1):9.
Single nucleotide polymorphism in the promoter region of the CD209 gene is associated with human predisposition to severe forms of tick-borne encephalitis
Barkhash AV, Perelygin AA, Babenko VN, Brinton MA, Voevoda MI. Antiviral Res. 2012 Jan;93(1):64-8.
Multistate outbreak of MDR TB identified by genotype cluster investigation
Barry PM, Gardner TJ, Funk E, Oren E, Field K, Shaw T, Langer AJ. Emerg Infect Dis. 2012 Jan;18(1):113-6.
Molecular epidemiology of influenza A(H1N1)pdm09 viruses from Pakistan in 2009-2010
Bashir Aamir U, Badar N, Mehmood MR, Nisar N, Suleman RM, Shaukat S, Sharif S, Kamran J, Zaidi SS, Kazi BM, Gubareva L, Xu X, Garten R, Klimov A.
PLoS One. 2012 ;7(8):e41866.
A hybrid approach for the automated finishing of bacterial genomes
Bashir A, Klammer AA, Robins WP, Chin CS, Webster D, Paxinos E, Hsu D, Ashby M, Wang S, Peluso P, Sebra R, Sorenson J, Bullard J, Yen J, Valdovino M, Mollova E, Luong K, Lin S, Lamay B, Joshi A, Rowe L, Frace M, Tarr CL, Turnsek M, Davis BM, Kasarskis A, Mekalanos JJ, Waldor MK, Schadt EE. Nat Biotechnol. 2012 Jul 1.
Evaluation for West Nile Virus (WNV) RNA in urine of patients within 5 months of WNV infection
Baty SA, Gibney KB, Staples JE, Patterson AB, Levy C, Lehman J, Wadleigh T, Feld J, Lanciotti R, Nugent CT, Fischer M. J Infect Dis. 2012 May;205(9):1476-7.
Heme oxygenase-1 gene promoter polymorphism is associated with reduced incidence of acute chest syndrome among children with sickle cell disease
Bean CJ, Boulet SL, Ellingsen D, Pyle ME, Barron-Casella EA, Casella JF, Payne AB, Driggers J, Trau HA, Yang G, Jones K, Ofori-Acquah SF, Hooper WC, Debaun MR. Blood. 2012 Sep 10.
Increased risk of venous thromboembolism is associated with genetic variation in heme oxygenase-1 in Blacks
Bean CJ, Boulet SL, Ellingsen D, Trau H, Ghaji N, Hooper WC, Austin H. Thromb Res. 2012 Sep 6.
Survey and genetic characterization of wastewater in Tunisia for Cryptosporidium spp., Giardia duodenalis, Enterocytozoon bieneusi, Cyclospora cayetanensis and Eimeria spp
Ben Ayed L, Yang W, Widmer G, Cama V, Ortega Y, Xiao L. J Water Health. 2012 Sep;10(3):431-44.
Clinical application of a multiplex real-time PCR assay for simultaneous detection of Legionella species, Legionella pneumophila and Legionella pneumophila serogroup 1
Benitez AJ, Winchell JM. J Clin Microbiol. 2012 Nov 7.
Multi-locus variable-number tandem-repeat analysis of Mycoplasma pneumoniae clinical isolates from 1962-present: a retrospective study
Benitez AJ, Diaz MH, Wolff BJ, Pimentel G, Njenga MK, Estevez A, Winchell JM.
J Clin Microbiol. 2012 Sep 5.
Reverse genetics recovery of Lujo virus and role of virus RNA secondary structures in efficient virus growth
Bergeron E, Chakrabarti AK, Bird BH, Dodd KA, McMullan LK, Spiropoulou CF, Nichol ST, Albarino CG. J Virol. 2012 Jul 25.
Health care needs of children with Tourette syndrome
Bitsko RH, Danielson M, King M, Visser SN, Scahill L, Perou R.
J Child Neurol. 2012 Nov 8.
Rapid, simultaneous detection of Clostridium sordellii and Clostridium perfringens in archived tissues by a novel PCR-based microsphere assay: diagnostic implications for pregnancy-associated toxic shock syndrome cases
Bhatnagar J, Deleon-Carnes M, Kellar KL, Bandyopadhyay K, Antoniadou ZA, Shieh WJ, Paddock CD, Zaki SR. Infect Dis Obstet Gynecol. 2012 ;2012:972845.
Analysis of a non-structural gene reveals evidence of possible hepatitis C virus (HCV) compartmentalization
Blackard JT, Ma G, Welge JA, Martin CM, Sherman KE, Taylor LE, Mayer KH, Jamieson DJ. J Med Virol. 2012 February;84(2):242-252.
Recommendations and proposed guidelines for assessing the cumulative evidence on joint effects of genes and environments on cancer occurrence in humans
Boffetta P, Winn DM, Ioannidis JP, Thomas DC, Little J, Davey Smith G, Cogliano VJ, Hecht SS, Seminara D, Vineis P, Khoury MJ. Int J Epidemiol. 2012 May 16.
Single cell gel electrophoresis assay (comet assay) for evaluating nanoparticles-induced DNA damage in cells
Bowman L, Castranova V, Ding M. Methods Mol Biol. 2012 ;906:415-22.
Public health action in genomics is now needed beyond newborn screening
Bowen MS, Kolor K, Dotson WD, Ned RM, Khoury MJ. Public Health Genomics. 2012 Sep 11.
Japanese encephalitis virus genotype replacement, Taiwan, 2009-2010
Chen YY, Fan YC, Tu WC, Chang RY, Shih CC, Lu IH, Chien MS, Lee WC, Chen TH, Chang GJ, Chiou SS. Emerg Infect Dis. 2011 Dec;17(12):2354-6.
Mutation analysis of the cross-reactive epitopes of Japanese encephalitis virus envelope glycoprotein
Chiou SS, Fan YC, Crill WD, Chang RY, Chang GJ. J Gen Virol. 2012 Jun;93(Pt 6):1185-92.
Molecular signatures associated with Mx1-mediated resistance to highly pathogenic influenza virus infection: mechanisms of survival
Cilloniz C, Pantin-Jackwood MJ, Ni C, Carter VS, Korth MJ, Swayne DE, Tumpey TM, Katze MG. J Virol. 2012 Mar;86(5):2437-46.
Antiviral activity of nucleoside analogues against norovirus
Costantini VP, Whitaker T, Barclay L, Lee D, McBrayer TR, Schinazi RF, Vinje J. Antivir Ther. 2012 Aug 14.
CFTR mutation analysis and haplotype associations in CF patients
Cordovado SK, Hendrix M, Greene CN, Mochal S, Earley MC, Farrell PM, Kharrazi M, Hannon WH, Mueller PW. Mol Genet Metab. 2012 Feb;105(2):249-54.
The 3' untranslated regions of influenza genomic sequences are 5'PPP-independent ligands for RIG-I
Davis WG, Bowzard JB, Sharma SD, Wiens ME, Ranjan P, Gangappa S, Stuchlik O, Pohl J, Donis RO, Katz JM, Cameron CE, Fujita T, Sambhara S. PLoS One. 2012 ;7(3):e32661.
Severe outcomes are associated with genogroup 2 genotype 4 norovirus outbreaks: a systematic literature review
Desai R, Hembree CD, Handel A, Matthews JE, Dickey BW, McDonald S, Hall AJ, Parashar UD, Leon JS, Lopman B. Clin Infect Dis. 2012 Apr 4.
Neuraminidase H275Y and hemagglutinin D222G mutations in a fatal case of 2009 pandemic influenza A (H1N1) virus infection
Devries A, Wotton J, Lees C, Boxrud D, Uyeki T, Lynfield R. Influenza Other Respi Viruses. 2012 Jan 14.
Development of a novel genus-specific real-time PCR assay for detection and differentiation of Bartonella species and genotypes
Diaz MH, Bai Y, Malania L, Winchell JM, Kosoy MY. J Clin Microbiol. 2012 Feb 29.
Comparison of HIV-1 resistance profiles in plasma RNA versus PBMC DNA in heavily treated patients in Honduras, a resource-limited country
Diallo K, Murillo WE, de Rivera IL, Albert J, Zhou Z, Nkengasong J, Zhang G, Sabatier JF, Yang C. Int J Mol Epidemiol Genet. 2012 ;3(1):56-65.
Luciferase reporter system for studying the effect of nanoparticles on gene expression
Ding M, Bowman L, Castranova V. Methods Mol Biol. 2012 ;906:403-14.
Genetic diversity and antibiotic resistance in Shigella dysenteriae and Shigella boydii strains isolated from children aged
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El-Gendy AM, Mansour A, Weiner MA, Pimentel G, Armstrong AW, Young SY, Elsayed N, Klena JD. Epidemiol Infect. 2012 Feb;140(2):299-310.
A permutation procedure to correct for confounders in case-control studies, including tests of rare variation
Epstein MP, Duncan R, Jiang Y, Conneely KN, Allen AS, Satten GA. Am J Hum Genet. 2012 Aug 10;91(2):215-23.
Nocardia amikacinitolerans sp. nov., an amikacin-resistant human pathogen
Ezeoke I, Klenk HP, Potter G, Schumann P, Moser BD, Lasker BA, Nicholson A, Brown JM. Int J Syst Evol Microbiol. 2012 Jun 15.
Cancer in children with nonchromosomal birth defects
Fisher PG, Reynolds P, Von Behren J, Carmichael SL, Rasmussen SA, Shaw GM. J Pediatr. 2012 Jun;160(6):978-83.
Genomic analysis of emm59 group A Streptococcus invasive strains, United States [PDF 221.09 KB]
Fittipaldi N, Olsen RJ, Beres SB, Van Beneden C, Musser JM. Emerg Infect Dis. 2012 ;18(4):650-652.
Assessing the influence of 5,10-methylenetetrahydrofolate reductase polymorphism on folate stability during long-term frozen storage, thawing, and repeated freeze/thawing of whole blood
Fazili Z, Sternberg MR, Pfeiffer CM. Clin Chim Acta. 2012 Jun 14;413(11-12):966-72.
Characterization of multi-drug resistant Salmonella enterica serovar Heidelberg from a ground turkey-associated outbreak in the United States, 2011
Folster JP, Pecic G, Rickert R, Taylor J, Zhao S, Fedorka-Cray PL, Whichard J, McDermott P. Antimicrob Agents Chemother. 2012 Mar 26.
Epidemic history of hepatitis C virus infection in two remote communities in Nigeria, West Africa
Forbi JC, Purdy MA, Campo DS, Vaughan G, Dimitrova ZE, Ganova-Raeva LM, Xia GL, Khudyakov YE. J Gen Virol. 2012 Mar 28.
Relevance, pathogenesis, and testing algorithm for mismatch repair-defective colorectal carcinomas: a report of the association for molecular pathology.
Funkhouser WK Jr, Lubin IM, Monzon FA, Zehnbauer BA, Evans JP, Ogino S, Nowak JA. J Mol Diagn. 2012 Mar;14(2):91-103.
Monitoring HPV type-specific prevalence over time through clinic-based surveillance: a perspective on vaccine effectiveness
Gaffga NH, Flagg EW, Weinstock HS, Shlay JC, Ghanem KG, Koutsky LA, Kerndt PR, Hsu KK, Unger ER, Datta SD. Vaccine. 2012 Jan 17.
Assuring the quality of next-generation sequencing in clinical laboratory practice
Gargis AS, Kalman L, Berry MW, Bick DP, Dimmock DP, Hambuch T, Lu F, Lyon E, Voelkerding KV, Zehnbauer BA, Agarwala R, Bennett SF, Chen B, Chin EL, Compton JG, Das S, Farkas DH, Ferber MJ, Funke BH, Furtado MR, Ganova-Raeva LM, Geigenmuller U, Gunselman SJ, Hegde MR, Johnson PL, Kasarskis A, Kulkarni S, Lenk T, Liu CS, Manion M, Manolio TA, Mardis ER, Merker JD, Rajeevan MS, Reese MG, Rehm HL, Simen BB, Yeakley JM, Zook JM, Lubin IM. Nat Biotechnol. 2012 Nov;30(11):1033-6.
Developmental genetics of secretory vesicle acidification during Caenorhabditis elegans spermatogenesis
Gleason EJ, Hartley PD, Henderson M, Hill-Harfe KL, Price PW, Weimer RM, Kroft TL, Zhu GD, Cordovado S, L'Hernault S W. Genetics. 2012 Jun;191(2):477-91.
Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event
Golubchik T, Brueggemann AB, Street T, Gertz RE, Spencer CC, Ho T, Giannoulatou E, Link-Gelles R, Harding RM, Beall B, Peto TE, Moore MR, Donnelly P, Crook DW, Bowden R. Nat Genet. 2012 ;44(3):352-5.
F8 gene mutation type and inhibitor development in patients with severe hemophilia A: systematic review and meta-analysis
Gouw SC, van den Berg HM, Oldenburg J, Astermark J, de Groot PG, Margaglione M, Thompson AR, van Heerde W, Boekhorst J, Miller CH, le Cessie S, van der Bom JG. Blood. 2012 Mar 22;119(12):2922-34.
Race-ethnic differences in the association of genetic loci with HbA1c levels and mortality in U.S. adults: the third National Health and Nutrition Examination Survey (NHANES III).
Grimsby JL, Porneala BC, Vassy JL, Yang Q, Florez JC, Dupuis J, Liu T, Yesupriya A, Chang MH, Ned RM, Dowling NF, Khoury MJ, Meigs JB, Magic Investigators T. BMC Med Genet. 2012 Apr 27;13(1):30.
The Jamaican historical experience of the impact of educational interventions on sickle cell disease child mortality
Grosse SD, Atrash HK, Odame I, Amendah D, Piel FB, Williams TN. Am J Prev Med. 2012 Jun;42(6):e101-3.
Identification of diverse Bartonella genotypes among small mammals from Democratic Republic of Congo and Tanzania
Gundi VA, Kosoy MY, Makundi RH, Laudisoit A. Am J Trop Med Hyg. 2012 Aug;87(2):319-26.
Multiwalled carbon nanotube-induced gene signatures in the mouse lung: potential predictive value for human lung cancer risk and prognosis
Guo NL, Wan YW, Denvir J, Porter DW, Pacurari M, Wolfarth MG, Castranova V, Qian Y.
J Toxicol Environ Health A. 2012 Sep 15;75(18):1129-53.
The association of variants in the FTO gene with longitudinal body mass index profiles in non-Hispanic white children and adolescents
Hallman DM, Friedel VC, Eissa MA, Boerwinkle E, Huber JC, Harrist RB, Srinivasan SR, Chen W, Dai S, Labarthe DR, Berenson GS. Int J Obes (Lond). 2012 Jan;36(1):61-8.
Human papillomavirus genotypes in high grade cervical lesions in the United States
Hariri S, Unger ER, Powell SE, Bauer HM, Bennett NM, Bloch KC, Niccolai LM, Schafer S, Steinau M, Markowitz LE. J Infect Dis. 2012 Oct 8.
Ethnicity interacts with the OPRM1 gene in experimental pain sensitivity
Hastie BA, Riley JL, Kaplan L, Herrera DG, Campbell CM, Virtusio K, Mogil JS, Wallace MR, Fillingim RB. Pain. 2012 Aug;153(8):1610-9.
Improved analysis of C26:0-lysophosphatidylcholine in dried-blood spots via negative ion mode HPLC-ESI-MS/MS for X-linked adrenoleukodystrophy newborn screening
Haynes CA, De Jesus VR. Clin Chim Acta. 2012 Aug 16;413(15-16):1217-21.
Prenatal exposure to polycyclic aromatic hydrocarbons, benzo[a]pyrene-DNA adducts, and genomic DNA methylation in cord blood
Herbstman JB, Tang D, Zhu D, Qu L, Sjodin A, Li Z, Camann D, Perera FP. Environ Health Perspect. 2012 May;120(5):733-8.
Implications of Internet availability of genomic information for public health practice
Hesse BW, Arora NK, Khoury MJ. Public Health Genomics. 2012 ;15(3-4):201-8.
Improving newborn screening follow-up in pediatric practices: quality improvement innovation network
Hinton CF, Neuspiel DR, Gubernick RS, Geleske T, Healy J, Kemper AR, Lloyd-Puryear MA, Saul RA, Thompson BH, Kaye CI. Pediatrics. 2012 Aug 6.
Detectable clonal mosaicism and its relationship to aging and cancer
Jacobs KB, Yeager M, Zhou W, Wacholder S, Wang Z, Rodriguez-Santiago B, Hutchinson A, Deng X, Liu C, Horner MJ, Cullen M, Epstein CG, Burdett L, Dean MC, Chatterjee N, Sampson J, Chung CC, Kovaks J, Gapstur SM, Stevens VL, Teras LT, Gaudet MM, Albanes D, Weinstein SJ, Virtamo J, Taylor PR, Freedman ND, Abnet CC, Goldstein AM, Hu N, Yu K, Yuan JM, Liao L, Ding T, Qiao YL, Gao YT, Koh WP, Xiang YB, Tang ZZ, Fan JH, Aldrich MC, Amos C, Blot WJ, Bock CH, Gillanders EM, Harris CC, Haiman CA, Henderson BE, Kolonel LN, Le Marchand L, McNeill LH, Rybicki BA, Schwartz AG, Signorello LB, Spitz MR, Wiencke JK, Wrensch M, Wu X, Zanetti KA, Ziegler RG, Figueroa JD, Garcia-Closas M, Malats N, Marenne G, Prokunina-Olsson L, Baris D, Schwenn M, Johnson A, Landi MT, Goldin L, Consonni D, Bertazzi PA, Rotunno M, Rajaraman P, Andersson U, Freeman LE, Berg CD, Buring JE, Butler MA, Carreon T, Feychting M, Ahlbom A, Gaziano JM, Giles GG, Hallmans G, Hankinson SE, Hartge P, Henriksson R, Inskip PD, Johansen C, Landgren A, McKean-Cowdin R, Michaud DS, Melin BS, Peters U, Ruder AM, et al. Nat Genet. 2012 May 6.
Evaluation of a high-throughput diagnostic system for detection of HIV-1 in dried blood spot samples from infants in Mozambique
Jani IV, Sabatier J, Vubil A, Subbarao S, Bila D, de Sousa A, Mabunda N, Garcia A, Skaggs B, Ellenberger D, Ramos A. J Clin Microbiol. 2012 Apr;50(4):1458-60.
Assessment of Rickettsia spp. and R. rickettsii real-time PCR assay performance on banked clinical samples
Kato CY, Chung IH, Robinson LK, Austin AL, Dasch GA, Massung RF. J Clin Microbiol. 2012 Nov 7.
Genetic variants in IGF-I, IGF-II, IGFBP-3, and adiponectin genes and colon cancer risk in African Americans and Whites
Keku TO, Vidal A, Oliver S, Hoyo C, Hall IJ, Omofoye O, McDoom M, Worley K, Galanko J, Sandler RS, Millikan R. Cancer Causes Control. 2012 Jul;23(7):1127-38.
Genetic and anatomic determinants of enzootic Venezuelan equine encephalitis virus infection of Culex (Melanoconion) taeniopus
Kenney JL, Adams AP, Gorchakov R, Leal G, Weaver SC. PLoS Negl Trop Dis. 2012 Apr;6(4):e1606.
Multilevel research and the challenges of implementing genomic medicine
Khoury MJ, Coates RJ, Fennell ML, Glasgow RE, Scheuner MT, Schully SD, Williams MS, Clauser SB. J Natl Cancer Inst Monogr. 2012 ;2012(44):112-20.
Frontiers in cancer epidemiology: a challenge to the research community from the Epidemiology and Genomics Research Program at the National Cancer Institute
Khoury MJ, Freedman AN, Gillanders EM, Harvey CE, Kaefer C, Reid BC, Rogers S, Schully SD, Seminara D, Verma M. Cancer Epidemiol Biomarkers Prev. 2012 Jul;21(7):999-1001.
Increased immunogenicity of avian influenza DNA vaccine delivered to the skin using a microneedle patch
Kim YC, Song JM, Lipatov AS, Choi SO, Lee JW, Donis RO, Compans RW, Kang SM, Prausnitz MR. Eur J Pharm Biopharm. 2012 Jun;81(2):239-47.
Association between adult height, genetic susceptibility and risk of glioma
Kitahara CM, Wang SS, Melin BS, Wang Z, Braganza M, Inskip PD, Albanes D, Andersson U, Beane Freeman LE, Buring JE, Carreon T, Feychting M, Gapstur SM, Gaziano JM, Giles GG, Hallmans G, Hankinson SE, Henriksson R, Hsing AW, Johansen C, Linet MS, McKean-Cowdin R, Michaud DS, Peters U, Purdue MP, Rothman N, Ruder AM, Sesso HD, Severi G, Shu XO, Stevens VL, Visvanathan K, Waters MA, White E, Wolk A, Zeleniuch-Jacquotte A, Zheng W, Hoover R, Fraumeni JF, Chatterjee N, Yeager M, Chanock SJ, Hartge P, Rajaraman P. Int J Epidemiol. 2012 Aug;41(4):1075-1085.
Pathogenicity and transmission in pigs of the novel A(H3N2)v influenza virus isolated from humans and characterization of swine H3N2 viruses isolated in 2010-2011
Kitikoon P, Vincent AL, Gauger PC, Schlink SN, Bayles DO, Gramer MR, Darnell D, Webby RJ, Lager KM, Swenson SL, Klimov A. J Virol. 2012 Jun;86(12):6804-14.
WHO recommendations for the viruses to be used in the 2012 Southern Hemisphere influenza vaccine: epidemiology, antigenic and genetic characteristics of influenza A(H1N1)pdm09, A(H3N2) and B influenza viruses collected from February to September 2011
Klimov AI, Garten R, Russell C, Barr IG, Besselaar TG, Daniels R, Engelhardt OG, Grohmann G, Itamura S, Kelso A, McCauley J, Odagiri T, Smith D, Tashiro M, Xu X, Webby R, Wang D, Ye Z, Yuelong S, Zhang W, Cox N. Vaccine. 2012 Oct 5;30(45):6461-71.
Public awareness and use of direct-to-consumer personal genomic tests from four state population-based surveys, and implications for clinical and public health practice
Kolor K, Duquette D, Zlot A, Foland J, Anderson B, Giles R, Wrathall J, Khoury MJ. Genet Med. 2012 Jul 19.
Bartonella bacteria in nature: where does population variability end and a species start?
Kosoy M, Hayman DT, Chan KS. Infect Genet Evol. 2012 Mar 23.
Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities
Kostka JE, Green SJ, Rishishwar L, Prakash O, Katz LS, Marino-Ramirez L, Jordan IK, Munk C, Ivanova N, Mikhailova N, Watson DB, Brown SD, Palumbo AV, Brooks SC. J Bacteriol. 2012 Aug;194(16):4461-2
Genomic characterization of Listeria monocytogenes strains involved in a multistate listeriosis outbreak associated with cantaloupe in US
Laksanalamai P, Joseph LA, Silk BJ, Burall LS, Tarr CL, Gerner-Smidt P, Datta AR. PLoS One. 2012 ;7(7):e42448.
Relaxation of adaptive evolution during the HIV-1 infection owing to reduction of CD4+ T cell counts
Leal E, Casseb J, Hendry M, Busch MP, Diaz RS. PLos One. 2012 ;7(6):e39776.
Influenza virus h5 DNA vaccination is immunogenic by intramuscular and intradermal routes in humans
Ledgerwood JE, Hu Z, Gordon IJ, Yamshchikov G, Enama ME, Plummer S, Bailer R, Pearce MB, Tumpey TM, Koup RA, Mascola JR, Nabel GJ, Graham BS. Clin Vaccine Immunol. 2012 Nov;19(11):1792-7.
Atypical Listeria monocytogenes serotype 4b strains harboring a lineage II-specific gene cassette
Lee S, Ward TJ, Graves LM, Wolf LA, Sperry K, Siletzky RM, Kathariou S. Appl Environ Microbiol. 2012 Feb;78(3):660-7.
Diversity of 16S-23S rDNA internal transcribed spacer (ITS) reveals phylogenetic relationships in Burkholderia pseudomallei and its near-neighbors
Liguori AP, Warrington SD, Ginther JL, Pearson T, Bowers J, Glass MB, Mayo M, Wuthiekanun V, Engelthaler D, Peacock SJ, Currie BJ, Wagner DM, Keim P, Tuanyok A. PLoS One. 2011 ;6(12):e29323.
Comprehensive Research Synopsis and Systematic Meta-Analyses in Parkinson's Disease Genetics: The PDGene Database.
Lill CM, Roehr JT, McQueen MB, Kavvoura FK, Bagade S, Schjeide BM, Schjeide LM, Meissner E, Zauft U, Allen NC, Liu T, Schilling M, Anderson KJ, Beecham G, Berg D, Biernacka JM, Brice A, Destefano AL, Do CB, Eriksson N, Factor SA, Farrer MJ, Foroud T, Gasser T, Hamza T, Hardy JA, Heutink P, Hill-Burns EM, Klein C, Latourelle JC, Maraganore DM, Martin ER, Martinez M, Myers RH, Nalls MA, Pankratz N, Payami H, Satake W, Scott WK, Sharma M, Singleton AB, Stefansson K, Toda T, Tung JY, Vance J, Wood NW, Zabetian CP; 23andMe, The Genetic Epidemiology of Parkinson's Disease (GEO-PD) Consortium; The International Parkinson's Disease Genomics Consortium (IPDGC); The Parkinson's Disease GWAS Consortium; The Wellcome Trust Case Control Consortium 2 (WTCCC2), Young P, Tanzi RE, Khoury MJ, Zipp F, Lehrach H, Ioannidis JP, Bertram L. PLoS Genet. 2012 Mar;8(3):e1002548.
Influence of HLA-DRB1 and HLA-DQB1 alleles on IgG antibody response to the P. vivax MSP-1, MSP-3alpha and MSP-9 in individuals from Brazilian endemic area
Lima-Junior JC, Rodrigues-da-Silva RN, Banic DM, Jiang J, Singh B, Fabricio-Silva GM, Porto LC, Meyer EV, Moreno A, Rodrigues MM, Barnwell JW, Galinski MR, de Oliveira-Ferreira J. PLoS One. 2012 ;7(5):e36419.
Serotypes and genetic profiles of Bordetella pertussis strains isolated in the city of Sao Paulo, 2006-2008
Leite D, Cassiday PK, Tatti KM, Vaz TM, Tondella ML. J Pediatr (Rio J). 2012 Jul-Aug;88(4):357-60.
Trimethyltin-induced neurotoxicity: gene expression pathway analysis, q-RT-PCR and immunoblotting reveal early effects associated with hippocampal damage and gliosis
Little AR, Miller DB, Li S, Kashon ML, O'Callaghan JP. Neurotoxicol Teratol. 2012 Jan;34(1):72-82.
Molecular surveillance of Cryptosporidium spp., Giardia duodenalis, and Enterocytozoon bieneusi by genotyping and subtyping parasites in wastewater
Li N, Xiao L, Wang L, Zhao S, Zhao X, Duan L, Guo M, Liu L, Feng Y. PLoS Negl Trop Dis. 2012 Sep;6(9):e1809.
Distinct and overlapping roles of Nipah virus P gene products in modulating the human endothelial cell antiviral response
Lo MK, Peeples ME, Bellini WJ, Nichol ST, Rota PA, Spiropoulou CF. PLoS One. 2012 ;7(10):e47790.
A new single-step PCR assay for the detection of the zoonotic malaria parasite Plasmodium knowlesi
Lucchi NW, Poorak M, Oberstaller J, Debarry J, Srinivasamoorthy G, Goldman I, Xayavong M, da Silva AJ, Peterson DS, Barnwell JW, Kissinger J, Udhayakumar V. PLoS One. 2012 ;7(2):e31848.
Genetic diversity among Clostridium botulinum strains harboring bont/A2 and bont/A3 genes
Luquez C, Raphael BH, Joseph LA, Meno SR, Fernandez RA, Maslanka SE. Appl Environ Microbiol. 2012 Oct 5.
Diversity and relationships of cocirculating modern human rotaviruses revealed using large-scale comparative genomics
McDonald SM, McKell AO, Rippinger CM, McAllen JK, Akopov A, Kirkness EF, Payne DC, Edwards KM, Chappell JD, Patton JT. J Virol. 2012 Sep;86(17):9148-62.
New insights into fluoroquinolone resistance in Mycobacterium tuberculosis: functional genetic analysis of gyrA and gyrB mutations
Malik S, Willby M, Sikes D, Tsodikov OV, Posey JE. PLoS One. 2012 ;7(6):e39754.
Pertussis pseudo-outbreak linked to specimens contaminated by Bordetella pertussis DNA from clinic surfaces
Mandal S, Tatti KM, Woods-Stout D, Cassiday PK, Faulkner AE, Griffith MM, Jackson ML, Pawloski LC, Wagner B, Barnes M, Cohn AC, Gershman KA, Messonnier NE, Clark TA, Tondella ML, Martin SW. Pediatrics. 2012 Jan 16.
Genetic characterization of atypical Mansonella (Mansonella) ozzardi microfilariae in human blood samples from northeastern Peru
Marcos LA, Arrospide N, Recuenco S, Cabezas C, Weil GJ, Fischer PU. Am J Trop Med Hyg. 2012 Jul 23.
Molecular epidemiology of anthrax cases associated with recreational use of animal hides and yarn in the United States
Marston CK, Allen CA, Beaudry J, Price EP, Wolken SR, Pearson T, Keim P, Hoffmaster AR. PLoS One. 2011 ;6(12):e28274.
Complete genome sequence of Ikoma lyssavirus
Marston DA, Ellis RJ, Horton DL, Kuzmin IV, Wise EL, McElhinney LM, Banyard AC, Ngeleja C, Keyyu J, Cleaveland S, Lembo T, Rupprecht CE, Fooks AR. J Virol. 2012 Sep;86(18):10242-3.
Evaluation of blood collection filter papers for HIV-1 DNA PCR
Masciotra S, Khamadi S, Bile E, Puren A, Fonjungo P, Nguyen S, Girma M, Downing R, Ramos A, Subbarao S, Ellenberger D. J Clin Virol. 2012 Jul 7.
Concurrent serotyping and genotyping of pneumococci by use of PCR and electrospray ionization mass spectrometry
Massire C, Ge